publication . Article . 2021

Animal board invited review: Advances in proteomics for animal and food sciences

Almeida, A.M.; Bassols, A.; Bendixen, E.; Bhide, M.; Ceciliani, F.; Cristobal, S.; Eckersall, P.D.; Hollung, K.; Lisacek, F.; Mazzucchelli, G.; ...
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Open Access
  • Published: 01 Jan 2021 Journal: Animal, volume 9, issue 1, pages 1-17 (issn: 1751-7311, eissn: 1751-732X, Copyright policy)
  • Publisher: Cambridge University Press (CUP)
Abstract
Animal production and health (APH) is an important sector in the world economy, representing a large proportion of the budget of all member states in the European Union and in other continents. APH is a highly competitive sector with a strong emphasis on innovation and, albeit with country to country variations, on scientific research. Proteomics (the study of all proteins present in a given tissue or fluid - i.e. the proteome) has an enormous potential when applied to APH. Nevertheless, for a variety of reasons and in contrast to disciplines such as plant sciences or human biomedicine, such potential is only now being tapped. To counter such limited usage, 6 years ago we created a consortium dedicated to the applications of Proteomics to APH, specifically in the form of a Cooperation in Science and Technology (COST) Action, termed FA1002 - Proteomics in Farm Animals: www.cost-faproteomics.org. In 4 years, the consortium quickly enlarged to a total of 31 countries in Europe, as well as Israel, Argentina, Australia and New Zealand. This article has a triple purpose. First, we aim to provide clear examples on the applications and benefits of the use of proteomics in all aspects related to APH. Second, we provide insights and possibilities on the new trends and objectives for APH proteomics applications and technologies for the years to come. Finally, we provide an overview and balance of the major activities and accomplishments of the COST Action on Farm Animal Proteomics. These include activities such as the organization of seminars, workshops and major scientific conferences, organization of summer schools, financing Short-Term Scientific Missions (STSMs) and the generation of scientific literature. Overall, the Action has attained all of the proposed objectives and has made considerable difference by putting proteomics on the global map for animal and veterinary researchers in general and by contributing significantly to reduce the East-West and North-South gaps existing in the European farm animal research. Future activities of significance in the field of scientific research, involving members of the action, as well as others, will likely be established in the future. European Science Foundation (Brussels, Belgium) info:eu-repo/semantics/publishedVersion
Persistent Identifiers

doi: 10.1017/s1751731114002602

handle: 11250/2503271 , 10400.1/11363 , 11250/2503273

pmc: PMC4301196

pmid: 25359324

Sustainable Development Goals (SDG)
3. Good health, 9. Industry and infrastructure
Subjects
free text keywords: Animal Science and Zoology, Trout Oncorhynchus-Mykiss, Dry-Cured Ham, Staphylococcus-Aureus Mastitis, Longissimus-thoracis muscle, Multivariate data-analysis, Globule-membrane proteome, Local chicken breeds, Bovine-milk proteome, Mareks-disease virus, Egg-white proteins, Proteomics, farm animals, aquaculture, animal health, post-harvest, Proteomics; farm animals; aquaculture; animal health; post-harvest, Clinical Medicine, Klinisk medicin, Proteomics; farm animals; aquaculture; animal health; post-harvest, Proteomics, farm animals, aquaculture, animal health, post-harvest, Animal culture, SF1-1100, Research Article, Animal Board Invited Review, Action (philosophy), Biotechnology, business.industry, business, Animal Welfare (journal), European union, media_common.cataloged_instance, media_common, Variety (cybernetics), World economy, Scientific literature, Biology, Proteomics, Public relations, Biomedicine
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163 references, page 1 of 11

Affolter M, Grass L, Vanrobaeys F, Casado B and Kussmann M 2010 Qualitative and quantitative profiling of the bovine milk fat globule membrane proteome. Journal of Proteomics 73, 1079–1088.19944786 [OpenAIRE] [PubMed]

Albalat A, Husi H, Siwi J, Nally J, Eckersall PD and Mullen W 2014 Capillary electrophoresis interfaced with a mass spectrometer (CE-MS): technical considerations and applicability for biomarker studies in animals. Current Protein & Peptide Science 15, 23–35.24555889 [PubMed]

Almeida AM, Plowman JE, Harland DP, Thomas A, Kilminster T, Scanlon T, Milton J, Greeff J, Oldham C and Clerens S 2014 Influence of feed restriction on the wool proteome: a combined iTRAQ and fiber structural study. Journal of Proteomics 103, 170–177.24709639 [PubMed]

Alves RN, Cordeiro O, Silva TS, Richard N, de Vareilles M, Marino G, Di Marco P, Rodrigues PM and Conceicao LE 2010 Metabolic molecular indicators of chronic stress in gilthead seabream (Sparus aurata) using comparative proteomics. Aquaculture 299, 57–66.

Anderson NL, Polanski M, Pieper R, Gatlin T, Tirumalai RS, Conrads TP, Veenstra TD, Adkins JN, Pounds JG, Fagan R and Lobley A 2004 The human plasma proteome – a nonredundant list developed by combination of four separate sources. Molecular & Cellular Proteomics 3, 311–326.14718574 [PubMed]

Bantscheff M, Lemeer S, Savitski MM and Kuster B 2012 Quantitative mass spectrometry in proteomics: critical review update from 2007 to the present. Analytical and Bioanalytical Chemistry 404, 939–965.22772140 [OpenAIRE] [PubMed]

Bassols A, Turk R and Roncada P 2014 A proteomics perspective: from animal welfare to food safety. Current Protein & Peptide Science 15, 156–168.24555902 [OpenAIRE] [PubMed]

Bendixen E, Taylor R, Hollung K, Hildrum KI, Picard B and Bouley J 2005 Proteomics, an approach towards understanding the biology of meat quality In Indicators of milk and beef quality (ed. JF Hocquette and S Gigli), pp. 81–94 Wageningen Academic Publishers, Wageningen, Netherlands.

Beynon RJ, Doherty MK, Pratt JM and Gaskell SJ 2005 Multiplexed absolute quantification in proteomics using artificial QCAT proteins of concatenated signature peptides. Nature Methods 2, 587–589.16094383 [PubMed]

Biering E, Villoing S, Sommerset I and Christie K 2005 Update on viral vaccines for fish. Developments in Biologicals 121, 97–113.15962473 [PubMed]

Bislev SL, Deutsch EW, Sun Z, Farrah T, Aebersold R, Moritz RL, Bendixen E and Codrea MC 2012 a. A Bovine PeptideAtlas of milk and mammary gland proteomes. Proteomics 12, 2895–2899.22837157 [OpenAIRE] [PubMed]

Bislev SL, Kusebauch U, Codrea MC, Beynon RJ, Harman VM, Rontved CM, Aebersold R, Moritz RL and Bendixen E 2012 b. Quantotypic properties of QconCAT peptides targeting bovine host response to Streptococcus uberis . Journal of Proteome Research 11, 1832–1843.22256911 [OpenAIRE] [PubMed]

Bjarnadottir S, Hollung K, Hoy M, Bendixen E, Codrea M and Veiseth-Kent E 2012 Changes in protein abundance between tender and tough meat from bovine Longissimus thoracis muscle assessed by isobaric Tag for Relative and Absolute Quantitation (iTRAQ) and 2-dimensional gel electrophoresis analysis. Journal of Animal Science 90, 2035–2043.22178849 [OpenAIRE] [PubMed]

Blokhuis HJ, Hopster H, Geverink NA, Korte SM and van Reenen CG 1998 Studies of stress in farm animals. Comparative Haematology International 8, 94–101.

Boehmer JL 2011 Proteomic analyses of host and pathogen responses during bovine mastitis. Journal of Mammary Gland Biology and Neoplasia 16, 323–338.21892748 [OpenAIRE] [PubMed]

163 references, page 1 of 11
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