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SARS-CoV-2 variant timemaps

appsOther research productkeyboard_double_arrow_right Other ORP type 10 Feb 2021 English Zenodo NIH | De Novo Assembly Tools: R...
Authors: Warren, Rene; Birol, Inanc;

doi: 10.5281/zenodo.4533433 , 10.5281/zenodo.4768461 , 10.5281/zenodo.4782683 , 10.5281/zenodo.4839338 , 10.5281/zenodo.4895651 , 10.5281/zenodo.4899895 , 10.5281/zenodo.4901080 , 10.5281/zenodo.4906982 , 10.5281/zenodo.4905305 , 10.5281/zenodo.4905235 , 10.5281/zenodo.4930880 , 10.5281/zenodo.5079988

Abstract

The attached compressed file package supplements our research article. It comprises SARS-CoV-2 variant timemaps SVG files for 2020 and 2021, updated with data submitted to GISAID as of February 10th 2021 (inclusive). It is a snapshot of the webpage hosting these maps (https://bcgsc.github.io/SARS2) on that day and includes the script and single nucleotide variation (SNV) report files used to generate these and could be used by anyone to generate additional and custom interactive SVG maps. The frequently updated and comprehensive SARS-CoV-2 genome SNV reports (https://www.bcgsc.ca/downloads/btl/SARS-CoV-2/mutations) represent a wealth of variant information that could be mined to gain further insights into the rapid SARS-CoV-2 coronavirus evolution in human hosts.

Keywords

SARS-CoV-2, COVID-19, genome timemaps, Interactive SVG, SARS variants, GISAID

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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    		 Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    		 Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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download
citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
downloads
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544
24
Funded by
NIH| De Novo Assembly Tools: Research with Unbiased Engines - Renewal (DNA-TRUER)
Project
De Novo Assembly Tools: Research with Unbiased Engines - Renewal (DNA-TRUER)
  • Funder: National Institutes of Health (NIH)
  • Project Code: 2R01HG007182-04A1
  • Funding stream: NATIONAL HUMAN GENOME RESEARCH INSTITUTE
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