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COVID-19 Software

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COVID-19 Software

The following results are related to COVID-19. Are you interested to view more results? Visit OpenAIRE - Explore.
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1,648 research outcomes, page 2 of 165
  • software . 2022
    Open Access
    Authors:
    Lucie Contamin; Shaun Truelove; Shi Chen; csmith701; scc-usc; Harry Hochheiser; John; Przemek Porebski; Jiangzhuo Chen; GuidoEspana; ...
    Persistent Identifiers
    Publisher: Zenodo

    May 2022 release of the US COVID-19 Scenario Modeling Hub.

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  • software . 2022
    Open Access
    Authors:
    pekarj; Andrew Rambaut;
    Persistent Identifiers
    Publisher: Zenodo

    No description provided.

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  • software . 2022
    Open Access
    Authors:
    jiaweioxford;
    Persistent Identifiers
    Publisher: Zenodo

    Full Changelog: https://github.com/jiaweioxford/COVID19_antibody_response_first_dose/commits/version1

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  • software . 2022
    Closed Access
    Authors:
    Rawan Alaufi; Dr. Manal Kalkatawi; Dr. Felwa Abukhodair;
    Persistent Identifiers
    Publisher: Zenodo

    COVID-CapsNet: A Capsule Network Model to Detect COVID-19 from CT Images

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  • software . 2022
    Open Access
    Authors:
    Flyngse;
    Persistent Identifiers
    Publisher: Zenodo

    No description provided.

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  • software . 2022
    Open Access
    Authors:
    Daniele Ramazzotti; alexgraudenzi;
    Persistent Identifiers
    Publisher: Zenodo

    In this repository we provide the code to replicate the early detection analysis of SARS-CoV-2 variants from deep sequencing samples. We provide in the directory named "1_variant_calling" the adopted variant calling pipeline for SARS-CoV-2 paired-end Illumina amplicon s...

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  • software . 2022
    Open Access
    Authors:
    Daniel Park; Chris Tomkins-Tinch; Simon Ye; Irwin Jungreis; Ilya Shlyakhter; Hayden Metsky; Lydia Andreyevna Krasilnikova; Hanna; Sushma Chaluvadi; Mike Lin; ...
    Persistent Identifiers
    Publisher: Zenodo

    What's Changed Minor functional updates CDC contractual updates to sarscov2_illumina_full (min coverage, genome name default prefix) - #419 pangolin tasks: update_dbs_now invokes update data only (not pangolin software) - #420 Docker image updates only: pangolin dock...

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  • software . 2022
    Open Access
    Authors:
    Jingwen Zhu;
    Publisher: Zenodo

    A novel vaccination allocation model based on spatio-temporal heterogeneity of epidemiological landscapes

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  • software . 2022
    Open Access
    Authors:
    Oliver Eales; Matt Whitaker; Haowei Wang; c97sr; Caroline Walters; Rich FitzJohn; Kylie Ainslie;
    Persistent Identifiers
    Publisher: Zenodo

    A release including code supporting the submission of the paper "The new normal? Dynamics and scale of the SARS-CoV-2 variant Omicron epidemic in England"

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  • software . 2022
    Open Access
    Authors:
    Nikos Bosse; Sam Abbott; Hugo Gruson; Sebastian Funk; Nicholas G Reich;
    Persistent Identifiers
    Publisher: Zenodo

    Major update to the package and most package functions with lots of breaking changes. Feature updates new and updated Readme and vignette the proposed scoring workflow was reworked. Functions were changed so they can easily be piped and have simplified arguments and ou...

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1,648 research outcomes, page 2 of 165